Do you need %Rank? (need more time computation)
DeepCNN-Ineo
Powered by Manman Lu, Linfeng Xu, Lu Xie
E.g. HLA-A*02:01 HLA-A*01:01
E.g. FSADIFFFF FQSNFQEFY (9-mer or 10-mer)
Epitope/Mut peptide/neoantigen
HLA allele
Deep Learning Model for Predicting Immunogenicity of Neoantigens based on Convolutional Neural Network
dbPepNeo 2.0
Database of Neoantigen Peptides from Mass Spectrometry and TCR Recognition
DeepCNN-Ineo can be used to predict the immunogenicity neoantigen. Predictive score value greater than 0.8 is suggested as Immunogenicity-High , the score between 0.5-0.8 is suggested as Immunogenicity-Low, and the score less than 0.5 is suggested as Non-immunogenicity. Examples can be clicked to test it. Usage instructions
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upload file:
Or if you have a large amount of data, you can upload a file (Name.txt) containing the HLA and the peptide. Example
